LOCUS MMP-IRES- 8561 bp DNA SYN 31-Mar-2003 DEFINITION MMP with an IRES and GFPneo. The neo fusion is not as bright as GFP by itself. SOURCE ORGANISM MLV REFERENCE 1 (bases 1 to 8561) AUTHORS Gray,JT, Mulligan,RC TITLE Direct Submission JOURNAL Submitted (31-Mar-2003) John T. Gray, Richard C. Mulligan Telephone: (617) 432-0045 E-mail: gray@hihg.med.harvard.edu Harvard Gene Therapy Initiative Vector Core Lab, Room 412 Harvard Institutes for Medicine 77 Avenue Louis Pasteur Boston, MA 02115 USA FEATURES Locations/Qualifiers BASE COUNT 2002 a 2353 c 2204 g 2002 t ORIGIN 1 AAGCTTGCAT GCCTGCAGGT CGACTCTAGG CACATAAAGA AAAACATAAC TAACCAAGCT 61 GCAGCCGAGA CAGTGAAAAG AACCGTTAAA ACGGTTTGTT TTAAATAAAC TGAATTATTT 121 AGAGTCATTT CTTTGGTAGG AAAGTACATT GGCACGTAAA GGAGCCCAAA GCAATCTGTG 181 GAAAGCCCAG GCTGGGAGCC CAGCAGTTTG CATCCCCTCC TGGCGTGTAC CTAAGGGTTT 241 CTTAATTGTG TGGTTTCTAA ATCTTCCAGA GGGTTTGTCT CATTCACTTC CACTTCGGTG 301 CACAATACTT GGACGCGGAT TTACTGTCTT AGCATCTATC GGTGGCCCTT CGATTGAGGC 361 TGAACCTGAG GCCCACTTCT TCAGCTTGTT AAGGAGAGCA CAAGCACCAG AAGAGGCTGA 421 CCCGGCAGAC CTGTGGGCAT TTTTAACAAG GGCCTCCTGG GTCTGTGGGA GGCAGGCTTA 481 CATAAGGTGC AAATTAGAAA TATAAATAAT AAGCCCATAT CAATTTGTCA TCTTTTTTTA 541 AGCTCAAGTT TTGAAAGACC CCACCTGTAG GTTTGGCAAG CTAGCTTAAG TAACGCCATT 601 TTGCAAGGCA TGGAAAATAC ATAACTGAGA ATAGAGAAGT TCAGATCAAG GTTAGGAACA 661 GAGAGACAGC AGAATATGGG CCAAACAGGA TATCTGTGGT AAGCAGTTCC TGCCCCGGCT 721 CAGGGCCAAG AACAGTTGGA ACAGCAGAAT ATGGGCCAAA CAGGATATCT GTGGTAAGCA 781 GTTCCTGCCC CGGCTCAGGG CCAAGAACAG ATGGTCCCCA GATGCGGTCC CGCCCTCAGC 841 AGTTTCTAGA GAACCATCAG ATGTTTCCAG GGTGCCCCAA GGACCTGAAA TGACCCTGTG 901 CCTTATTTGA ACTAACCAAT CAGTTCGCTT CTCGCTTCTG TTCGCGCGCT TCTGCTCCCC 961 GAGCTCAATA AAAGAGCCCA CAACCCCTCA CTCGGCGCGC CAGTCCTCCG ATAGACTGCG 1021 TCGCCCGGGT ACCCGTGTTC TCAATAAACC CTCTTGCAGT TGCATCCGAC TCGTGGTCTC 1081 GCTGTTCCTT GGGAGGGTCT CCTCTGAGTG ATTGACTACC CGTCAGCGGG GTCTTTCATT 1141 TGGAGGTTCC ACCGAGATTT GGAGACCCCT GCCCAGGGAC CACCGACCCC CCCGCCGGGA 1201 GGTAAGCTGG CCAGCAACTT ATCTGTGTCT GTCCGATTGT CTAGTGTCTA TGACTGATTT 1261 TATGCGCCTG CGTCGGTACT AGTTAGCTAA CTAGCTCTGT ATCTGGCGGA CCCGTGGTGG 1321 AACTGACGAG TTCGGAACAC CCGGCCGCAA CCCTGGGAGA CGTCCCAGGG ACTTCGGGGG 1381 CCGTTTTTGT GGCCCGACCT GAGTCCTAAA ATCCCGATCG TTTAGGACTC TTTGGTGCAC 1441 CCCCCTTAGA GGAGGGATAT GTGGTTCTGG TAGGAGACGA GAACCTAAAA CAGTTCCCGC 1501 CTCCGTCTGA ATTTTTGCTT TCGGTTTGGG ACCGAAGCCG CGCCGCGCGT CTTGTCTGCT 1561 GCAGCATCGT TCTGTGTTGT CTCTGTCTGA CTGTGTTTCT GTATTTGTCT GAAAATATGG 1621 GCCCGGGCTA GACTGTTACC ACTCCCTTAA GTTTGACCTT AGGTCACTGG AAAGATGTCG 1681 AGCGGATCGC TCACAACCAG TCGGTAGATG TCAAGAAGAG ACGTTGGGTT ACCTTCTGCT 1741 CTGCAGAATG GCCAACCTTT AACGTCGGAT GGCCGCGAGA CGGCACCTTT AACCGAGACC 1801 TCATCACCCA GGTTAAGATC AAGGTCTTTT CACCTGGCCC GCATGGACAC CCAGACCAGG 1861 TCCCCTACAT CGTGACCTGG GAAGCCTTGG CTTTTGACCC CCCTCCCTGG GTCAAGCCCT 1921 TTGTACACCC TAAGCCTCCG CCTCCTCTTC CTCCATCCGC CCCGTCTCTC CCCCTTGAAC 1981 CTCCTCGTTC GACCCCGCCT CGATCCTCCC TTTATCCAGC CCTCACTCCT TCTCTAGGCG 2041 CCCCCATATG GCCATATGAG ATCTTATATG GGGCACCCCC GCCCCTTGTA AACTTCCCTG 2101 ACCCTGACAT GACAAGAGTT ACTAACAGCC CCTCTCTCCA AGCTCACTTA CAGGCTCTCT 2161 ACTTAGTCCA GCACGAAGTC TGGAGACCTC TGGCGGCAGC CTACCAAGAA CAACTGGACC 2221 GACCGGTGGT ACCTCACCCT TACCGAGTCG GCGACACAGT GTGGGTCCGC CGACACCAGA 2281 CTAAGAACCT AGAACCTCGC TGGAAAGGAC CTTACACAGT CCTGCTGACC ACCCCCACCG 2341 CCCTCAAAGT AGACGGCATC GCAGCTTGGA TACACGCCGC CCACGTGAAG GCTGCCGACC 2401 CCGGGGGTGG ACCATCCTCT AGACTGCCAT GGTGAAGCTT GGATCCTCTA GAGAATTCCC 2461 CCTCTCCCTC CCCCCCCCCT AACGTTACTG GCCGAAGCCG CTTGGAATAA GGCCGGTGTG 2521 CGTTTGTCTA TATGTTATTT TCCACCATAT TGCCGTCTTT TGGCAATGTG AGGGCCCGGA 2581 AACCTGGCCC TGTCTTCTTG ACGAGCATTC CTAGGGGTCT TTCCCCTCTC GCCAAAGGAA 2641 TGCAAGGTCT GTTGAATGTC GTGAAGGAAG CAGTTCCTCT GGAAGCTTCT TGAAGACAAA 2701 CAACGTCTGT AGCGACCCTT TGCAGGCAGC GGAACCCCCC ACCTGGCGAC AGGTGCCTCT 2761 GCGGCCAAAA GCCACGTGTA TAAGATACAC CTGCAAAGGC GGCACAACCC CAGTGCCACG 2821 TTGTGAGTTG GATAGTTGTG GAAAGAGTCA AATGGCTCTC CTCAAGCGTA TTCAACAAGG 2881 GGCTGAAGGA TGCCCAGAAG GTACCCCATT GTATGGGATC TGATCTGGGG CCTCGGTGCA 2941 CATGCTTTAC ATGTGTTTAG TCGAGGTTAA AAAAACGTCT AGGCCCCCCG AACCACGGGG 3001 ACGTGGTTTT CCTTTGAAAA ACACGATGAT AAGCTTGCCA CAACCATGTT GCACCTGACT 3061 CCTGAGGAGA AGTCTATGGT GAGCAAGGGC GAGGAGCTGT TCACCGGGGT GGTGCCCATC 3121 CTGGTCGAGC TGGACGGCGA CGTAAACGGC CACAAGTTCA GCGTGTCCGG CGAGGGCGAG 3181 GGCGATGCCA CCTACGGCAA GCTGACCCTG AAGTTCATCT GCACCACCGG CAAGCTGCCC 3241 GTGCCCTGGC CCACCCTCGT GACCACCCTG ACCTACGGCG TGCAGTGCTT CAGCCGCTAC 3301 CCCGACCACA TGAAGCAGCA CGACTTCTTC AAGTCCGCCA TGCCCGAAGG CTACGTCCAG 3361 GAGCGCACCA TCTTCTTCAA GGACGACGGC AACTACAAGA CCCGCGCCGA GGTGAAGTTC 3421 GAGGGCGACA CCCTGGTGAA CCGCATCGAG CTGAAGGGCA TCGACTTCAA GGAGGACGGC 3481 AACATCCTGG GGCACAAGCT GGAGTACAAC TACAACAGCC ACAACGTCTA TATCATGGCC 3541 GACAAGCAGA AGAACGGCAT CAAGGTGAAC TTCAAGATCC GCCACAACAT CGAGGACGGC 3601 AGCGTGCAGC TCGCCGACCA CTACCAGCAG AACACCCCCA TCGGCGACGG CCCCGTGCTG 3661 CTGCCCGACA ACCACTACCT GAGCACCCAG TCCGCCCTGA GCAAAGACCC CAACGAGAAG 3721 CGCGATCACA TGGTCCTGCT GGAGTTCGTG ACCGCCGCCG GGATCACTCT CGGCATGGAC 3781 GAGCTGTACA AGTCCGGCAT CCCCCGGGCT GCAGCCAATA TGGGATCGGC CATTGAACAA 3841 GATGGATTGC ACGCAGGTTC TCCGGCCGCT TGGGTGGAGA GGCTATTCGG CTATGACTGG 3901 GCACAACAGA CAATCGGCTG CTCTGATGCC GCCGTGTTCC GGCTGTCAGC GCAGGGGCGC 3961 CCGGTTCTTT TTGTCAAGAC CGACCTGTCC GGTGCCCTGA ATGAACTGCA GGACGAGGCA 4021 GCGCGGCTAT CGTGGCTGGC CACGACGGGC GTTCCTTGCG CAGCTGTGCT CGACGTTGTC 4081 ACTGAAGCGG GAAGGGACTG GCTGCTATTG GGCGAAGTGC CGGGGCAGGA TCTCCTGTCA 4141 TCTCACCTTG CTCCTGCCGA GAAAGTATCC ATCATGGCTG ATGCAATGCG GCGGCTGCAT 4201 ACGCTTGATC CGGCTACCTG CCCATTCGAC CACCAAGCGA AACATCGCAT CGAGCGAGCA 4261 CGTACTCGGA TGGAAGCCGG TCTTGTCGAT CAGGATGATC TGGACGAAGA GCATCAGGGG 4321 CTCGCGCCAG CCGAACTGTT CGCCAGGCTC AAGGCGCGCA TGCCCGACGG CGAGGATCTC 4381 GTCGTGACGC ATGGCGATGC CTGCTTGCCG AATATCATGG TGGAAAATGG CCGCTTTTCT 4441 GGATTCATCG ACTGTGGCCG GCTGGGTGTG GCGGACCGCT ATCAGGACAT AGCGTTGGCT 4501 ACCCGTGATA TTGCTGAAGA GCTTGGCGGC GAATGGGCTG ACCGCTTCCT CGTGCTTTAC 4561 GGTATCGCCG CTCCCGATTC GCAGCGCATC GCCTTCTATC GCCTTCTTGA CGAGTTCTTC 4621 TGAGGGGATC AATTCTCTAG TTCTAGCCTC GAGACCGTAC GTGCGCGCGA ATGCATCCAG 4681 ATCCGGATTA GTCCAATTTG TTAAAGACAG GATATCAGTG GTCCAGGCTC TAGTTTTGAC 4741 TCAACAATAT CACCAGCTGA AGCCTATAGA GTACGAGCCA TAGATAAAAT AAAAGATTTT 4801 ATTTAGTCTC CAGAAAAAGG GGGGAATGAA AGACCCCACC TGTAGGTTTG GCAAGCTAGC 4861 TTAAGTAACG CCATTTTGCA AGGCATGGAA AATACATAAC TGAGAATAGA GAAGTTCAGA 4921 TCAAGGTTAG GAACAGAGAG ACAGCAGAAT ATGGGCCAAA CAGGATATCT GTGGTAAGCA 4981 GTTCCTGCCC CGGCTCAGGG CCAAGAACAG TTGGAACAGC AGAATATGGG CCAAACAGGA 5041 TATCTGTGGT AAGCAGTTCC TGCCCCGGCT CAGGGCCAAG AACAGATGGT CCCCAGATGC 5101 GGTCCCGCCC TCAGCAGTTT CTAGAGAACC ATCAGATGTT TCCAGGGTGC CCCAAGGACC 5161 TGAAATGACC CTGTGCCTTA TTTGAACTAA CCAATCAGTT CGCTTCTCGC TTCTGTTCGC 5221 GCGCTTCTGC TCCCCGAGCT CAATAAAAGA GCCCACAACC CCTCACTCGG CGCGCCAGTC 5281 CTCCGATAGA CTGCGTCGCC CGGGTACCCG TGTTCTCAAT AAACCCTCTT GCAGTTGCAT 5341 CCGACTCGTG GTCTCGCTGT TCCTTGGGAG GGTCTCCTCT GAGTGATTGA CTACCCGTCA 5401 GCGGGGTCTT TCAGTTTCTC CCACCTACAC AGGTCTCACT AACATTCCTG ATGTGCCGCA 5461 GGGACTCCGT CAGCCCGGTT TTTGTTTATA ATAAAATGCA AGAACAGTGT TCCCTTCAAG 5521 CCAGACTACA TCCTGACTCT CGGCTTTATA AAAGAATGTT GAAGGGCTCT GTGGACTATC 5581 TGCCACACGA CTTTTAAGAT TTTTATGCCT CCTGGATGAG GGATTTAGTC AATCTATCCT 5641 CGTCTATTTT GCTGGCTTCT CCGTATTTTA AATTTCTAGT TTGCACTCCC TTCCTGAGAG 5701 CACGGCGATT GCAGAGTAGT TAATACTCTG AGGGCAGGCT TCTGTGAAAA GGTTGCCTGG 5761 GCTCAGTGTG AGATTTTGCC ATAAAAAGGG GTCCTGCCCC TGTGTACAGA CAGATCGGAA 5821 TCTAGAGTGC ATACTCAGAG TCCCCGCGGT TCCGGGGCTC TGATCTCAGG GCATCTTTGC 5881 CTAGAGATCC TCTACGCCGG ACGCATCGTG GCCGGGTACC GAGCTCGAAT TCGTAATCAT 5941 GGTCATAGCT GTTTCCTGTG TGAAATTGTT ATCCGCTCAC AATTCCACAC AACATACGAG 6001 CCGGAAGCAT AAAGTGTAAA GCCTGGGGTG CCTAATGAGT GAGCTAACTC ACATTAATTG 6061 CGTTGCGCTC ACTGCCCGCT TTCCAGTCGG GAAACCTGTC GTGCCAGCTG CATTAATGAA 6121 TCGGCCAACG CGCGGGGAGA GGCGGTTTGC GTATTGGGCG CTCTTCCGCT TCCTCGCTCA 6181 CTGACTCGCT GCGCTCGGTC GTTCGGCTGC GGCGAGCGGT ATCAGCTCAC TCAAAGGCGG 6241 TAATACGGTT ATCCACAGAA TCAGGGGATA ACGCAGGAAA GAACATGTGA GCAAAAGGCC 6301 AGCAAAAGGC CAGGAACCGT AAAAAGGCCG CGTTGCTGGC GTTTTTCCAT AGGCTCCGCC 6361 CCCCTGACGA GCATCACAAA AATCGACGCT CAAGTCAGAG GTGGCGAAAC CCGACAGGAC 6421 TATAAAGATA CCAGGCGTTT CCCCCTGGAA GCTCCCTCGT GCGCTCTCCT GTTCCGACCC 6481 TGCCGCTTAC CGGATACCTG TCCGCCTTTC TCCCTTCGGG AAGCGTGGCG CTTTCTCATA 6541 GCTCACGCTG TAGGTATCTC AGTTCGGTGT AGGTCGTTCG CTCCAAGCTG GGCTGTGTGC 6601 ACGAACCCCC CGTTCAGCCC GACCGCTGCG CCTTATCCGG TAACTATCGT CTTGAGTCCA 6661 ACCCGGTAAG ACACGACTTA TCGCCACTGG CAGCAGCCAC TGGTAACAGG ATTAGCAGAG 6721 CGAGGTATGT AGGCGGTGCT ACAGAGTTCT TGAAGTGGTG GCCTAACTAC GGCTACACTA 6781 GAAGGACAGT ATTTGGTATC TGCGCTCTGC TGAAGCCAGT TACCTTCGGA AAAAGAGTTG 6841 GTAGCTCTTG ATCCGGCAAA CAAACCACCG CTGGTAGCGG TGGTTTTTTT GTTTGCAAGC 6901 AGCAGATTAC GCGCAGAAAA AAAGGATCTC AAGAAGATCC TTTGATCTTT TCTACGGGGT 6961 CTGACGCTCA GTGGAACGAA AACTCACGTT AAGGGATTTT GGTCATGAGA TTATCAAAAA 7021 GGATCTTCAC CTAGATCCTT TTAAATTAAA AATGAAGTTT TAAATCAATC TAAAGTATAT 7081 ATGAGTAAAC TTGGTCTGAC AGTTACCAAT GCTTAATCAG TGAGGCACCT ATCTCAGCGA 7141 TCTGTCTATT TCGTTCATCC ATAGTTGCCT GACTCCCCGT CGTGTAGATA ACTACGATAC 7201 GGGAGGGCTT ACCATCTGGC CCCAGTGCTG CAATGATACC GCGAGACCCA CGCTCACCGG 7261 CTCCAGATTT ATCAGCAATA AACCAGCCAG CCGGAAGGGC CGAGCGCAGA AGTGGTCCTG 7321 CAACTTTATC CGCCTCCATC CAGTCTATTA ATTGTTGCCG GGAAGCTAGA GTAAGTAGTT 7381 CGCCAGTTAA TAGTTTGCGC AACGTTGTTG CCATTGCTAC AGGCATCGTG GTGTCACGCT 7441 CGTCGTTTGG TATGGCTTCA TTCAGCTCCG GTTCCCAACG ATCAAGGCGA GTTACATGAT 7501 CCCCCATGTT GTGCAAAAAA GCGGTTAGCT CCTTCGGTCC TCCGATCGTT GTCAGAAGTA 7561 AGTTGGCCGC AGTGTTATCA CTCATGGTTA TGGCAGCACT GCATAATTCT CTTACTGTCA 7621 TGCCATCCGT AAGATGCTTT TCTGTGACTG GTGAGTACTC AACCAAGTCA TTCTGAGAAT 7681 AGTGTATGCG GCGACCGAGT TGCTCTTGCC CGGCGTCAAT ACGGGATAAT ACCGCGCCAC 7741 ATAGCAGAAC TTTAAAAGTG CTCATCATTG GAAAACGTTC TTCGGGGCGA AAACTCTCAA 7801 GGATCTTACC GCTGTTGAGA TCCAGTTCGA TGTAACCCAC TCGTGCACCC AACTGATCTT 7861 CAGCATCTTT TACTTTCACC AGCGTTTCTG GGTGAGCAAA AACAGGAAGG CAAAATGCCG 7921 CAAAAAAGGG AATAAGGGCG ACACGGAAAT GTTGAATACT CATACTCTTC CTTTTTCAAT 7981 ATTATTGAAG CATTTATCAG GGTTATTGTC TCATGAGCGG ATACATATTT GAATGTATTT 8041 AGAAAAATAA ACAAATAGGG GTTCCGCGCA CATTTCCCCG AAAAGTGCCA CCTGACGTCT 8101 AAGAAACCAT TATTATCATG ACATTAACCT ATAAAAATAG GCGTATCACG AGGCCCTTTC 8161 GTCTCGCGCG TTTCGGTGAT GACGGTGAAA ACCTCTGACA CATGCAGCTC CCGGAGACGG 8221 TCACAGCTTG TCTGTAAGCG GATGCCGGGA GCAGACAAGC CCGTCAGGGC GCGTCAGCGG 8281 GTGTTGGCGG GTGTCGGGGC TGGCTTAACT ATGCGGCATC AGAGCAGATT GTACTGAGAG 8341 TGCACCATAT GCGGTGTGAA ATACCGCACA GATGCGTAAG GAGAAAATAC CGCATCAGGC 8401 GCCATTCGCC ATTCAGGCTG CGCAACTGTT GGGAAGGGCG ATCGGTGCGG GCCTCTTCGC 8461 TATTACGCCA GCTGGCGAAA GGGGGATGTG CTGCAAGGCG ATTAAGTTGG GTAACGCCAG 8521 GGTTTTCCCA GTCACGACGT TGTAAAACGA CGGCCAGTGC C //